Subset checks
Great project. Is there any plan to support fast subset checks?
To my understanding, currently the fastest way to check whether sorted array a is a subset of sorted array b would be
len(snp.intersect(a, b))==len(a)
the worst-case of which cannot be improved much. However, on average, one should be able to abort early once the first element of a is encountered that is not in b.
Cheers!